HSPB6 heat shock protein family B (small) member 6 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: HSPB6provided by VGNC
Official Full Name: heat shock protein family B (small) member 6provided by VGNC
Primary source: VGNC:VGNC:53526
See related: Ensembl:ENSCAFG00845001363
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	1	NC_051805.1 (117481343..117483832)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	1	NC_006583.4 (116283627..116286116)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	1	NC_049222.1 (117723717..117726206)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	1	NC_049261.1 (117044719..117047208)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	1	NC_049742.1 (116668337..116670826)

Chromosome 1 - NC_051805.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein folding chaperone	IEA Inferred from Electronic Annotation more info	PubMed
enables structural constituent of eye lens	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein refolding	IEA Inferred from Electronic Annotation more info	PubMed
involved_in response to heat	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: heat shock protein beta-6

Names: heat shock protein, alpha-crystallin-related, B6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051805.1 Reference ROS_Cfam_1.0

Range

117481343..117483832

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038657389.1 → XP_038513317.1 heat shock protein beta-6

UniProtKB/TrEMBL

A0A8C0KXX1, A0A8C0THZ2, A0A8I3ME47, A0A8I3RRG1, A0A8P0TTI9

Related

ENSCAFP00845001858.1, ENSCAFT00845002342.1

Conserved Domains (2) summary

pfam00525
Location:3 → 58

Crystallin; Alpha crystallin A chain, N terminal

cl00175
Location:66 → 144

alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

Alternate UMICH_Zoey_3.1

Genomic

NC_049261.1 Alternate UMICH_Zoey_3.1

Range

117044719..117047208

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038468504.1 → XP_038324432.1 heat shock protein beta-6

Conserved Domains (2) summary

pfam00525
Location:3 → 58

Crystallin; Alpha crystallin A chain, N terminal

cl00175
Location:66 → 144

alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049742.1 Alternate UNSW_CanFamBas_1.0

Range

116668337..116670826

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038593534.1 → XP_038449462.1 heat shock protein beta-6

Conserved Domains (2) summary

pfam00525
Location:3 → 58

Crystallin; Alpha crystallin A chain, N terminal

cl00175
Location:66 → 144

alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049222.1 Alternate UU_Cfam_GSD_1.0

Range

117723717..117726206

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038529278.1 → XP_038385206.1 heat shock protein beta-6

UniProtKB/TrEMBL

A0A8C0KXX1, A0A8C0THZ2, A0A8I3ME47, A0A8I3RRG1, A0A8P0TTI9

Conserved Domains (2) summary

pfam00525
Location:3 → 58

Crystallin; Alpha crystallin A chain, N terminal

cl00175
Location:66 → 144

alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

116283627..116286116

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_541688.7 → XP_541688.1 heat shock protein beta-6

UniProtKB/TrEMBL

A0A8C0KXX1, A0A8C0THZ2, A0A8I3ME47, A0A8I3RRG1, A0A8P0TTI9

Conserved Domains (2) summary

pfam00525
Location:3 → 58

Crystallin; Alpha crystallin A chain, N terminal

cl00175
Location:66 → 144

alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.