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    VIRMA vir like m6A methyltransferase associated [ Canis lupus familiaris (dog) ]

    Gene ID: 477942, updated on 11-Apr-2024

    Summary

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    Official Symbol
    VIRMAprovided by VGNC
    Official Full Name
    vir like m6A methyltransferase associatedprovided by VGNC
    Primary source
    VGNC:VGNC:48267
    See related
    Ensembl:ENSCAFG00845015063
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    KIAA1429
    Orthologs
    human mouse all
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    Genomic context

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    See VIRMA in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 29 NC_051833.1 (39416236..39474970, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 29 NC_006611.4 (39373642..39432868, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 29 NC_049250.1 (39865414..39924438, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 29 NC_049289.1 (39428976..39487947, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 29 NC_049770.1 (39424265..39483428, complement)

    Chromosome 29 - NC_051833.1Genomic Context describing neighboring genes Neighboring gene RAD54 homolog B Neighboring gene charged multivesicular body protein 3-like Neighboring gene fibrinogen silencer binding protein Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC119866745 Neighboring gene epithelial splicing regulatory protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA N6-methyladenosine methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein virilizer homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051833.1 Reference ROS_Cfam_1.0

      Range
      39416236..39474970 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038441637.1 → XP_038297565.1  protein virilizer homolog isoform X2

      UniProtKB/TrEMBL
      A0A8C0KFQ6, A0A8C0KHH6, A0A8C0THZ0, A0A8I3RYP6
      Related
      ENSCAFP00845021276.1, ENSCAFT00845027037.1
      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    2. XM_038441636.1 → XP_038297564.1  protein virilizer homolog isoform X1

      UniProtKB/TrEMBL
      A0A8C0KFQ6, A0A8C0KI86, A0A8C0P5T0, A0A8I3NWL7
      Related
      ENSCAFP00845021221.1, ENSCAFT00845026959.1
      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049289.1 Alternate UMICH_Zoey_3.1

      Range
      39428976..39487947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038516205.1 → XP_038372133.1  protein virilizer homolog isoform X2

      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    2. XM_038516204.1 → XP_038372132.1  protein virilizer homolog isoform X1

      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049770.1 Alternate UNSW_CanFamBas_1.0

      Range
      39424265..39483428 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038644017.1 → XP_038499945.1  protein virilizer homolog isoform X2

      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    2. XM_038644016.1 → XP_038499944.1  protein virilizer homolog isoform X1

      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049250.1 Alternate UU_Cfam_GSD_1.0

      Range
      39865414..39924438 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038579781.1 → XP_038435709.1  protein virilizer homolog isoform X2

      UniProtKB/TrEMBL
      A0A8C0KFQ6, A0A8C0KHH6, A0A8C0THZ0, A0A8I3RYP6
      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    2. XM_038579780.1 → XP_038435708.1  protein virilizer homolog isoform X1

      UniProtKB/TrEMBL
      A0A8C0KFQ6, A0A8C0KI86, A0A8C0P5T0, A0A8I3NWL7
      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      39373642..39432868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038460854.1 → XP_038316782.1  protein virilizer homolog isoform X2

      UniProtKB/TrEMBL
      A0A8C0KFQ6, A0A8C0KHH6, A0A8C0THZ0, A0A8I3RYP6
      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal

    2. XM_038460853.1 → XP_038316781.1  protein virilizer homolog isoform X1

      UniProtKB/TrEMBL
      A0A8C0KFQ6, A0A8C0KI86, A0A8C0P5T0, A0A8I3NWL7
      Conserved Domains (1) summary
      pfam15912
      Location:5 → 235
      VIR_N; Virilizer, N-terminal
    Nucleotide Protein
    Heading Accession and Version

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