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    CLDN7 claudin 7 [ Canis lupus familiaris (dog) ]

    Gene ID: 489466, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CLDN7provided by VGNC
    Official Full Name
    claudin 7provided by VGNC
    Primary source
    VGNC:VGNC:53320
    See related
    Ensembl:ENSCAFG00845020640
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CLDN7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (32329561..32331372, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (32362233..32364044, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (32430822..32432633, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (32294842..32296653, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (32253867..32255678, complement)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095875 Neighboring gene CTD nuclear envelope phosphatase 1 Neighboring gene elongator acetyltransferase complex subunit 5 Neighboring gene solute carrier family 2 member 4 Neighboring gene Y-box binding protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bicellular tight junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    claudin-7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      32329561..32331372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038665370.1 → XP_038521298.1  claudin-7

      UniProtKB/TrEMBL
      A0A8C0KCA2, A0A8C0N749, A0A8I3PKL1
      Related
      ENSCAFP00845028495.1, ENSCAFT00845036407.1
      Conserved Domains (1) summary
      pfam00822
      Location:4 → 182
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      32294842..32296653 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038475479.1 → XP_038331407.1  claudin-7

      Conserved Domains (1) summary
      pfam00822
      Location:4 → 182
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      32253867..32255678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038600829.1 → XP_038456757.1  claudin-7

      Conserved Domains (1) summary
      pfam00822
      Location:4 → 182
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      32430822..32432633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038536646.1 → XP_038392574.1  claudin-7

      UniProtKB/TrEMBL
      A0A8C0KCA2, A0A8C0N749, A0A8I3PKL1
      Conserved Domains (1) summary
      pfam00822
      Location:4 → 182
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      32362233..32364044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_546584.5 → XP_546584.3  claudin-7

      UniProtKB/TrEMBL
      A0A8C0KCA2, A0A8C0N749, A0A8I3PKL1
      Conserved Domains (1) summary
      pfam00822
      Location:4 → 182
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
    Nucleotide Protein
    Heading Accession and Version

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