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    ATG4A autophagy related 4A cysteine peptidase [ Canis lupus familiaris (dog) ]

    Gene ID: 481015, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ATG4Aprovided by VGNC
    Official Full Name
    autophagy related 4A cysteine peptidaseprovided by VGNC
    Primary source
    VGNC:VGNC:38223
    See related
    Ensembl:ENSCAFG00845018999
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ATG4A in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (83281769..83337418)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (67753046..67808661)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (82244510..82299838)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (80740818..80796428)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (82453368..82509012)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene proteasome 26S subunit, non-ATPase 10 Neighboring gene collagen type IV alpha 6 chain Neighboring gene protein BEX4-like Neighboring gene collagen type IV alpha 5 chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-phosphatidylethanolamide deconjugating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine protease ATG4A
    Names
    ATG4 autophagy related 4 homolog A
    XP_038306541.1
    XP_038379994.1
    XP_038443971.1
    XP_038508487.1
    XP_538136.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      83281769..83337418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038450613.1 → XP_038306541.1  cysteine protease ATG4A

      UniProtKB/TrEMBL
      A0A8C0K0S9, A0A8C0TML5
      Related
      ENSCAFP00845026258.1, ENSCAFT00845033541.1
      Conserved Domains (1) summary
      pfam03416
      Location:42 → 335
      Peptidase_C54; Peptidase family C54

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      80740818..80796428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524066.1 → XP_038379994.1  cysteine protease ATG4A

      Conserved Domains (1) summary
      pfam03416
      Location:42 → 335
      Peptidase_C54; Peptidase family C54

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      82453368..82509012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038652559.1 → XP_038508487.1  cysteine protease ATG4A

      Conserved Domains (1) summary
      pfam03416
      Location:42 → 335
      Peptidase_C54; Peptidase family C54

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      82244510..82299838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588043.1 → XP_038443971.1  cysteine protease ATG4A

      UniProtKB/TrEMBL
      A0A8C0K0S9, A0A8C0TML5
      Conserved Domains (1) summary
      pfam03416
      Location:42 → 335
      Peptidase_C54; Peptidase family C54

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      67753046..67808661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_538136.7 → XP_538136.5  cysteine protease ATG4A

      UniProtKB/TrEMBL
      A0A8C0K0S9, A0A8C0TML5
      Conserved Domains (1) summary
      pfam03416
      Location:42 → 335
      Peptidase_C54; Peptidase family C54
    Nucleotide Protein
    Heading Accession and Version

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