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    GC GC vitamin D binding protein [ Canis lupus familiaris (dog) ]

    Gene ID: 475172, updated on 5-Mar-2024

    Summary

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    Official Symbol
    GCprovided by VGNC
    Official Full Name
    GC vitamin D binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:41136
    See related
    Ensembl:ENSCAFG00845012014
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (61603086..61636545, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (60528533..60561906, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (61856182..61889922, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (61215897..61249598, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (60708804..60742244, complement)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3B subunit 4-like Neighboring gene solute carrier family 4 member 4 Neighboring gene uncharacterized LOC102152554 Neighboring gene ubiquitin carboxyl-terminal hydrolase 1-like Neighboring gene neuropeptide FF receptor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables vitamin D binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables vitamin transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vitamin transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in blood microparticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vitamin D-binding protein
    XP_038349933.1
    XP_038412224.1
    XP_038476163.1
    XP_038541792.1
    XP_863089.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      61603086..61636545 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038685864.1 → XP_038541792.1  vitamin D-binding protein

      UniProtKB/TrEMBL
      A0A8I3NFN0, A0A8P0SPZ6
      Related
      ENSCAFP00845016912.1, ENSCAFT00845021518.1
      Conserved Domains (3) summary
      smart00103
      Location:19 → 201
      ALBUMIN; serum albumin
      pfam09164
      Location:405 → 469
      VitD-bind_III; Vitamin D binding protein, domain III
      cl00031
      Location:208 → 384
      ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      61215897..61249598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494005.1 → XP_038349933.1  vitamin D-binding protein

      Conserved Domains (3) summary
      smart00103
      Location:19 → 201
      ALBUMIN; serum albumin
      pfam09164
      Location:405 → 469
      VitD-bind_III; Vitamin D binding protein, domain III
      cl00031
      Location:208 → 384
      ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      60708804..60742244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620235.1 → XP_038476163.1  vitamin D-binding protein

      Conserved Domains (3) summary
      smart00103
      Location:19 → 201
      ALBUMIN; serum albumin
      pfam09164
      Location:405 → 469
      VitD-bind_III; Vitamin D binding protein, domain III
      cl00031
      Location:208 → 384
      ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      61856182..61889922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556296.1 → XP_038412224.1  vitamin D-binding protein

      UniProtKB/TrEMBL
      A0A8I3NFN0, A0A8P0SPZ6
      Conserved Domains (3) summary
      smart00103
      Location:19 → 201
      ALBUMIN; serum albumin
      pfam09164
      Location:405 → 469
      VitD-bind_III; Vitamin D binding protein, domain III
      cl00031
      Location:208 → 384
      ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      60528533..60561906 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_857996.5 → XP_863089.1  vitamin D-binding protein

      See identical proteins and their annotated locations for XP_863089.1

      UniProtKB/TrEMBL
      A0A8I3NFN0, A0A8P0SPZ6
      Conserved Domains (3) summary
      smart00103
      Location:19 → 201
      ALBUMIN; serum albumin
      pfam09164
      Location:405 → 469
      VitD-bind_III; Vitamin D binding protein, domain III
      cl00031
      Location:208 → 384
      ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...
    Nucleotide Protein
    Heading Accession and Version

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