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    PDZK1IP1 PDZK1 interacting protein 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 475365, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PDZK1IP1provided by VGNC
    Official Full Name
    PDZK1 interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:44404
    See related
    Ensembl:ENSCAFG00845016726
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PDZK1IP1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (13629015..13635434)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (13632018..13638435)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (13566206..13572624)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (13428685..13435103)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (13496699..13503116)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene STIL centriolar assembly protein Neighboring gene TAL bHLH transcription factor 1, erythroid differentiation factor Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene uncharacterized LOC102151503 Neighboring gene uncharacterized LOC111098978 Neighboring gene cytochrome P450 family 4 subfamily X member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    PDZK1-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      13629015..13635434
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687754.1 → XP_038543682.1  PDZK1-interacting protein 1

      UniProtKB/TrEMBL
      A0A8I3NRD2
      Conserved Domains (1) summary
      pfam15807
      Location:1 → 114
      MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

    2. XM_038687753.1 → XP_038543681.1  PDZK1-interacting protein 1

      UniProtKB/TrEMBL
      A0A8I3NRD2
      Related
      ENSCAFP00845023279.1, ENSCAFT00845029641.1
      Conserved Domains (1) summary
      pfam15807
      Location:1 → 114
      MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      13428685..13435103
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038495758.1 → XP_038351686.1  PDZK1-interacting protein 1

    2. XM_038495757.1 → XP_038351685.1  PDZK1-interacting protein 1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      13496699..13503116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038622005.1 → XP_038477933.1  PDZK1-interacting protein 1

    2. XM_038622004.1 → XP_038477932.1  PDZK1-interacting protein 1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      13566206..13572624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038558133.1 → XP_038414061.1  PDZK1-interacting protein 1

      UniProtKB/TrEMBL
      A0A8C0SJT4

    2. XM_038558132.1 → XP_038414060.1  PDZK1-interacting protein 1

      UniProtKB/TrEMBL
      A0A8C0SJT4

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13632018..13638435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038451944.1 → XP_038307872.1  PDZK1-interacting protein 1

      UniProtKB/TrEMBL
      A0A8P0S9P9
      Conserved Domains (1) summary
      pfam15807
      Location:1 → 114
      MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

    2. XM_014119709.3 → XP_013975184.1  PDZK1-interacting protein 1

      UniProtKB/TrEMBL
      A0A8P0S9P9
      Conserved Domains (1) summary
      pfam15807
      Location:1 → 114
      MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1
    Nucleotide Protein
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