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    fkbpl FKBP prolyl isomerase like [ Danio rerio (zebrafish) ]

    Gene ID: 100149636, updated on 27-Mar-2024

    Summary

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    Official Symbol
    fkbplprovided by ZNC
    Official Full Name
    FKBP prolyl isomerase likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-4744
    See related
    Ensembl:ENSDARG00000095322 AllianceGenome:ZFIN:ZDB-GENE-030131-4744
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fb38d02; wu:fd57h06; wu:fv30d07; si:ch73-381f5.3
    Summary
    Acts upstream of or within vasculature development. Orthologous to human FKBPL (FKBP prolyl isomerase like). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See fkbpl in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (19106120..19119392)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (19179767..19193048)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100151028 Neighboring gene par-6 partitioning defective 6 homolog beta (C. elegans) Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA asparagine (anticodon GUU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. FKBPL is a critical antiangiogenic regulator of developmental and pathological angiogenesis. Yakkundi A, et al. Arterioscler Thromb Vasc Biol, 2015 Apr. PMID 25767277, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within vasculature development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within vasculature development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FK506-binding protein-like; FKBP prolyl isomerase like
    Names
    FK506 binding protein like
    WAF-1/CIP1 stabilizing protein 39

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      19106120..19119392
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005162114.4 → XP_005162171.1  FK506-binding protein-like

      See identical proteins and their annotated locations for XP_005162171.1

      UniProtKB/TrEMBL
      A0A8M1QKZ2, E9QEW1
      Conserved Domains (3) summary
      sd00006
      Location:264 → 292
      TPR; TPR repeat [structural motif]
      pfam13181
      Location:299 → 330
      TPR_8; Tetratricopeptide repeat
      pfam13414
      Location:263 → 329
      TPR_11; TPR repeat

    2. XM_001923883.7 → XP_001923918.1  FK506-binding protein-like

      See identical proteins and their annotated locations for XP_001923918.1

      UniProtKB/TrEMBL
      A0A8M1QKZ2, E9QEW1
      Related
      ENSDARP00000119473.2, ENSDART00000133550.3
      Conserved Domains (3) summary
      sd00006
      Location:264 → 292
      TPR; TPR repeat [structural motif]
      pfam13181
      Location:299 → 330
      TPR_8; Tetratricopeptide repeat
      pfam13414
      Location:263 → 329
      TPR_11; TPR repeat
    Nucleotide Protein Strain
    Heading Accession and Version

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