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    exoc6 exocyst complex component 6 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100490668, updated on 8-Mar-2024

    Summary

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    Official Symbol
    exoc6provided by Xenbase
    Official Full Name
    exocyst complex component 6provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1013433
    See related
    Ensembl:ENSXETG00000018180
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See exoc6 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (25343689..25509030, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (17048673..17203690, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 26 subfamily A member 1 Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene hematopoietically expressed homeobox Neighboring gene kinesin family member 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within vesicle tethering involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    exocyst complex component 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      25343689..25509030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031905941.1 → XP_031761801.1  exocyst complex component 6 isoform X3

      UniProtKB/TrEMBL
      F7AXL8
      Related
      ENSXETP00000039427.5, ENSXETT00000039427.5
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 769
      Sec15; Exocyst complex subunit Sec15-like

    2. XM_031905939.1 → XP_031761799.1  exocyst complex component 6 isoform X1

      UniProtKB/TrEMBL
      A0A8J1JV86
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 779
      Sec15; Exocyst complex subunit Sec15-like

    3. XM_031905940.1 → XP_031761800.1  exocyst complex component 6 isoform X2

      UniProtKB/TrEMBL
      A0A6I8QKS1
      Related
      ENSXETP00000073598.2, ENSXETT00000076864.2
      Conserved Domains (1) summary
      pfam04091
      Location:455 → 771
      Sec15; Exocyst complex subunit Sec15-like

    4. XM_018095925.2 → XP_017951414.2  exocyst complex component 6 isoform X4

      UniProtKB/TrEMBL
      A0A6I8RP48
      Related
      ENSXETP00000086598.2, ENSXETT00000099646.2
      Conserved Domains (1) summary
      pfam04091
      Location:455 → 761
      Sec15; Exocyst complex subunit Sec15-like
    Nucleotide Protein Strain
    Heading Accession and Version

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