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Platform GPL29810 Query DataSets for GPL29810
Status Public on Mar 02, 2024
Title BCBIO HUMAN CUSTOM PROTEOME MICROARRAY
Technology type spotted peptide or protein
Distribution non-commercial
Organism Homo sapiens
Manufacturer BCBIO (Guangzhou BCBIO Biotechnology Co., Ltd.)
Manufacture protocol Protein encoding open reading fromes(ORFs) were obtoined from public ORF librories or independently synthesized by the lobs of HengZhu & Seth Backshaw at Johns Hopkins University.
Using Gateway cloningin E. coli, individual ORF DNA sequences were shuttled into a yeast high-copy expression vector (pEGH-A) that produces N-terminal GST-fusion proteins.
Protein-encoding vectors were rescued from E.coli and used to transform S.cerevisiae yeast. Yeast were grown on plates to select individual transformed clones.
Successfully transformed yeast clones were bideirectionally sequenced to confirm correct ORF insertion and expected protein identity.Clones failing sequence QC were resynthesized.
To produce proteins, sequence-confirmed yeast clones are grown,lysed,and harvested.0.1% Triton buffers remove lipids. GST-fusion proteins are purified via GST-binding agarose beads.
For each protein production lot,random wells are run on gels to confirm purity and expected molecular weight. Plates with a protein sample failing gel QC remade.
The prolein production lot is aliquoted and frozen. Arravs are printed on nitrocellulose sides using Arrayjet printers.
Two slides from each batch are stained with anti-GST; >95% of spots must be GST+ for the array batch to pass QC. This confirms round-trip success of GST-fusion libranry synthesis & printing.
 
 
Submission date Mar 03, 2021
Last update date Mar 02, 2024
Contact name He Yan Bin
E-mail(s) heyanbin@bcbio.cn
Phone 18565610792
Organization name BCBIO
Street address Sino-European Center A, 2 Lingnan Avenue South, Shunde, Foshan, Guangdong, China
City Foshan
State/province GUANGDONG
ZIP/Postal code 528315
Country China
 
Samples (180) GSM5133683, GSM5133684, GSM5133685, GSM5133686, GSM5133687, GSM5133688 
Series (1)
GSE168198 Human serum: Control vs. Lung Cancer

Data table header descriptions
ID
Antibody type
Block
Column
Row
ORF
NAME

Data table
ID Antibody type Block Column Row ORF NAME
1 IgG 1 1 1 EZR JHU16385.P172B05
2 IgG 1 1 3 CTAG1A JHU17795.P221D02
3 IgG 1 1 5 ENO1 JHU04725.P236G04
4 IgG 1 2 1 EIF6 JHU00325.P004C06
5 IgG 1 2 3 CRNN JHU03003.P032D02
6 IgG 1 2 5 ELAVL4 JHU05591.P059G09
7 IgG 1 3 1 MUC1 JHU12884.P135E03
8 IgG 1 3 3 ESRRG JHU13725.P144A02
9 IgG 1 3 5 KIZ JHU16162.P170D04
10 IgG 1 4 1 CCDC94 JHU07414.P078H07
11 IgG 1 4 3 NECAB1 JHU09625.P101E07
12 IgG 1 4 5 CFHR5 JHU11627.P122B12
13 IgG 1 5 1 IRF2BP1 JHU12393.P130H08
14 IgG 1 5 3 SLC16A4 JHU13671.P143B01
15 IgG 1 5 5 KCTD18 JHU13933.P146H08
16 IgG 1 6 1 P2RX5 JHU07161.P075H04
17 IgG 1 6 3 ANXA1 JHU08261.P087E10
18 IgG 1 6 5 CHML JHU10196.P107F05
19 IgG 1 7 1 DR1 JHU02434.P177B07
20 IgG 1 7 3 IL2RB JHU03306.P227E07

Total number of rows: 182

Table truncated, full table size 6 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary data files not provided

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