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Series GSE113597 Query DataSets for GSE113597
Status Public on Sep 04, 2018
Title Minipuberty and Sexual Dimorphism in the Infant Human Thymus
Organism Homo sapiens
Experiment type Expression profiling by array
Non-coding RNA profiling by array
Summary AIRE expression in thymus is downregulated by estrogen after puberty, what probably renders women more susceptible to autoimmune disorders. Here we investigated the effects of minipuberty on male and female infant human thymic tissue in order to verify if this initial transient increase in sex hormones - along the first six months of life - could affect thymic transcriptional network regulation and AIRE expression. Gene co-expression network analysis for differentially expressed genes and miRNA-target analysis revealed sex differences in thymic tissue during minipuberty, but such sex differences were not detected in thymic tissues from donors aged 7-18 moths of age, the non-puberty group. AIRE expression was essentially the same in both sexes in minipuberty and in non-puberty groups, as assessed by genomic and immunohistochemical assays. However, AIRE-interactors networks showed several differences in all groups regarding gene-gene expression correlation. Therefore, minipuberty and genomic mechanisms interact in shaping thymic sexual dimorphism along the first six moths of life.

This SuperSeries is composed of the SubSeries listed below.
 
Overall design Thymus transcriptomic profiles of patients undergoing minipuberty comparing male versus female infants in order to identify differentially expressed transcripts.

Refer to individual Series
 
Citation(s) 30177771
Submission date Apr 24, 2018
Last update date Jul 25, 2021
Contact name Carlos Alberto Moreira-Filho
E-mail(s) carlos.moreira@hc.fm.usp.br
Phone 55-11-3061-8449
Organization name Faculdade de Medicina da Universidade de Sao Paulo
Department Departments of Pediatrics
Lab LIM36
Street address Av. Dr. Eneas Carvalho de Aguiar 647
City Sao Paulo
State/province SP
ZIP/Postal code 05403-900
Country Brazil
 
Platforms (2)
GPL13497 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GPL21576 Agilent-070156 Human_miRNA_V21.0_Microarray 046064 (Probe Name version)
Samples (52)
GSM2674568 thymus_minipuberty_MM1
GSM2674569 thymus_minipuberty_MM2
GSM2674570 thymus_minipuberty_MM3
This SuperSeries is composed of the following SubSeries:
GSE100204 Minipuberty and Thymic Sexual Dimorphism in the Infant Human Thymus [puberty miRNA]
GSE113534 Minipuberty and Thymic Sexual Dimorphism in the Infant Human Thymus [minipuberty]
GSE113535 Minipuberty and Thymic Sexual Dimorphism in the Infant Human Thymus [non-puberty]
Relations
BioProject PRJNA453189

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113597_RAW.tar 415.6 Mb (http)(custom) TAR (of TXT)

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