|
| Status |
Public on Nov 01, 2019 |
| Title |
Strand specific Sequencing of myr-Akt1 induced transcriptomes in NSCLC cell lines |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To identify the genes significantly regulated by Akt1 activation in NSCLC, myr-Akt1 stable over-expressed A549, HCC827 cells and control vector cells were constructed. The transcriptomes were analyzed by rRNA-depleted strand specific RNA-seq, and LINC01546 was identified significantly up-regulated in myr-Akt1 A549 and HCC827 cells, as compared to vector cells.
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| |
|
| Overall design |
Transcriptomes profiles of A549-myr-Akt1, A549-vector, HCC827-myr-Akt1 and HCC827-vecotr were generated by Illumina NovaSeq 6000.
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| |
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| Contributor(s) |
Tian H, Wu X, Cai J |
| Citation(s) |
33046716 |
| Submission date |
Sep 05, 2019 |
| Last update date |
Oct 27, 2020 |
| Contact name |
Han Tian |
| E-mail(s) |
tianhan@mail2.sysu.edu.cn
|
| Phone |
86-20-87333587
|
| Organization name |
Sun Yat-sen University
|
| Department |
Zhongshan School of Medicine
|
| Street address |
No.74, Zhongshan Er Road
|
| City |
Guangzhou |
| State/province |
Guangdong |
| ZIP/Postal code |
510080 |
| Country |
China |
| |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (4)
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| Relations |
| BioProject |
PRJNA564014 |
| SRA |
SRP220432 |
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