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Series GSE148802 Query DataSets for GSE148802
Status Public on Apr 17, 2020
Title Pharmacologic IRE1/XBP1s Activation Confers Targeted ER Proteostasis Reprogramming
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Activation of the IRE1/XBP1s signaling arm of the unfolded protein response (UPR) is a promising strategy to correct defects in endoplasmic reticulum (ER) proteostasis implicated in diverse diseases. However, no pharmacologic activators of this pathway identified to date are suitable for ER proteostasis remodeling through selective activation of IRE1/XBP1s signaling. Here, we use high-throughput screening to identify non-toxic compounds that induce ER proteostasis remodeling through IRE1/XBP1s activation. We employ transcriptional profiling to stringently confirm that our prioritized compounds selectively activate IRE1/XBP1s signaling without activating other cellular stress-responsive signaling pathways. Furthermore, we demonstrate that our compounds improve ER proteostasis of destabilized variants of amyloid precursor protein (APP) through an IRE1-dependent mechanism and reduce APP-associated mitochondrial toxicity in cellular models. These results establish highly-selective IRE1 activating compounds that can be widely employed to define the functional importance of IRE1/XBP1s activity for ER proteostasis regulation in the context of health and disease.
 
Overall design Comparisons of the transcriptomes of HEK293T cells treated with DMSO or identified IRE1/XBP1s activating compounds IXA1, IXA4, IXA6, or global UPR activator thapsigargin (Tg)
 
Contributor(s) Grandjean JM, Powers ET, Wiseman RL
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Submission date Apr 16, 2020
Last update date Apr 17, 2020
Contact name R. Luke Wiseman
Organization name The Scripps Research Institute
Department Molecular Medicine
Lab Wiseman
Street address 10550 North Torrey Pines Road
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (15)
GSM4481415 HEK293T_DMSO-1
GSM4481416 HEK293T_DMSO-2
GSM4481417 HEK293T_DMSO-3
Relations
BioProject PRJNA625752
SRA SRP256643

Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary file Size Download File type/resource
GSE148802_DESeq_IXA.xlsx 4.7 Mb (ftp)(http) XLSX
GSE148802_IXA_Aligned_Counts.xlsx 1.2 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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