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Series GSE149753 Query DataSets for GSE149753
Status Public on Oct 27, 2020
Title Evaluation of the effects of low nanomolar bisphenol A-like compounds’ levels on early human embryonic development and lipid metabolism with human embryonic stem cell in vitro differentiation models
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The widely used chemical bisphenol A (BPA) has been associated with several health effects. In recent years, many derivatives were developed to replace BPA without thorough toxicological evaluation. Here, we employed a human embryoid body (EB)-based in vitro global differentiation and hepatic specification models, followed by RNA-seq analyses, to comprehensively study the potential developmental toxicity of six BPA replacements (BPS, BPF, BPZ, BPB, BPE, and BPAF), as compared to BPA. We found that bisphenols may disrupt lineage commitment and lipid metabolism during early embryonic development. These effects mostly manifested via the dysregulation of HOX and APO family genes. Moreover, among the seven bisphenols analyzed, BPE, due to lower potential developmental toxicity, stood out as a relatively safe substitute of BPA in many applications, especially for infant/baby products.
 
Overall design Examination of 18 samples in total. There are 14 treated samples: seven bisphenols-treatment samples (BPAF, BPA, BPB, BPE, BPF, BPS and BPZ in 100 nM) and each treatment has two replicates. There are 2 controls which are 0.01% DMSO. Treated samples and controls are day21 samples. There are 2 day0 samples which are human embryonic stem cells (H1 hESCs).
 
Contributor(s) Liang X, Yang R, Yin N, Faiola F
Citation(s) 33172680
Submission date May 01, 2020
Last update date Jan 27, 2021
Contact name Xiaoxing Liang
E-mail(s) liangxiaoxing16@mails.ucas.ac.cn
Organization name Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences,
Street address 18 Shuangqing Road
City Beijing
ZIP/Postal code 100082
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (18)
GSM4511782 BPAF_1
GSM4511783 BPAF_2
GSM4511784 BPA_1
Relations
BioProject PRJNA629844
SRA SRP259957

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149753_core_table.xls.gz 37.5 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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