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Series GSE197553 Query DataSets for GSE197553
Status Public on Nov 23, 2022
Title Mineralocorticoid Receptor Antagonists and Glucocorticoids Differentially Affect Skeletal Muscle Inflammation and Pathology in Muscular Dystrophy
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the RNA Sequencing of myleoid cells isolated from 4.5-week-old mdx mice that were administered spironolactone, prednisolone, or vehicle for 7 days. We find that both spironolactone and prednisolone downregulated expression of genes involved in inflammation and fibrosis, while prednisolone further perturbed cell cycle genes.
 
Overall design Single cell suspensions were prepared from quadriceps from 4.5-week-old mdx mice treated with spironolactone, prednisolone, or vehicle for 7 days. Cells from 3 pairs of mdx quadriceps were pooled for each biological replicate. Myeloid cells were isolated and RNA was extracted from myeloid cells.
 
Contributor(s) Howard ZM, Gomatam C, Rabolli CP, Lowe J, Bansal SS, Accornero F, Rafael-Fortney JA
Citation(s) 36040807
Submission date Feb 27, 2022
Last update date Nov 24, 2022
Contact name Jill Rafael-Fortney
Organization name The Ohio State Universtiy
Department Physiology and Cell Biology
Street address 370 W. 9th Avenue
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL28457 DNBSEQ-G400 (Mus musculus)
Samples (9)
GSM5920491 myeloid cells, Prd1
GSM5920492 myeloid cells, Prd2
GSM5920493 myeloid cells, Prd3
Relations
BioProject PRJNA810878

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197553_Prd_vs_Suc.csv.gz 1.4 Mb (ftp)(http) CSV
GSE197553_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
GSE197553_Spr_vs_Prd.csv.gz 977.8 Kb (ftp)(http) CSV
GSE197553_Spr_vs_Suc.csv.gz 961.0 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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