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Series GSE27286 Query DataSets for GSE27286
Status Public on Aug 15, 2011
Title Human ependymoma samples, Subgrouping [aCGH - German Cancer Research Center human 33K BAC array]
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Whole-genome array comparative genomic hybridization (aCGH) of human ependymoma tumors.
DOP-PCR products were spotted in triplicate onto NexterionTM Slide E epoxysilane-coated slides (PEQLAB, Erlangen, Germany) using a spotting robot (VersArray ChipWriterTM Pro system,BioRad, Munich, Germany) at 20C and 40% humidity. After spotting, slides were cross-linked,baked for 1 hr at 80C, and cross-linked again.
 
Overall design Fresh frozen tumor material was collected during tumor resection. Copy number aberrations represent the status at diagnosis.
 
Citation(s) 21840481
Submission date Feb 14, 2011
Last update date Jan 18, 2013
Contact name Hendrik Witt
E-mail(s) h.witt@dkfz.de
Phone +496221424594
Fax +496221424639
Organization name German Cancer Research Center
Department Molecular Genetics
Lab Prof. Peter Lichter
Street address INF 580
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platforms (1)
GPL13171 German Cancer Research Center human 33K BAC array
Samples (76)
GSM675443 fresh-frozen tissue_MDT_EP1
GSM675444 fresh-frozen tissue_MDT_EP100
GSM675445 fresh-frozen tissue_MDT_EP102
This SubSeries is part of SuperSeries:
GSE27287 Delineation of Two Clinically and Molecularly Distinct Subgroups of Posterior Fossa Ependymoma.
Relations
BioProject PRJNA142105

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27286_RAW.tar 181.4 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table
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