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Series GSE42927 Query DataSets for GSE42927
Status Public on Dec 01, 2013
Title Expression data from cultured mouse BALB 3T3 cells containing bacterial plasmid gene mucAB
Organism Mus musculus
Experiment type Expression profiling by array
Summary The gene mucAB has an error-prone activity in bacteria. We introduced mucAB into mouse 3T3 cells with an expression vector and found drastic increase of spontaneous transformation, accompanied by increase of expression of eight oncogenes, i. e., Gpnmb, Foxml, Maff, Myc, Aurka, Aukb, Fosl1, and Anxa8 and decrease of expression in two oncogenes, i. e., Lrig1 and RhoX in order of the magnitude of change, as compared with those in non-treated 3T3 cells.
 
Overall design Transformation of cultured mouse BALB 3T3 cells was used as an indicator of cellular oncogenesis. We examined effects of introduction of foreign bacterial plasmid gene into mouse cells on spontaneous transformation frequency, accompanied by change of expression of known oncogenes. To do this, 3T3 cells with or without mucAB were compared for expression of known genes, using the microarray method.
 
Contributor(s) Tanooka H, Sasaki H
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Submission date Dec 14, 2012
Last update date Jan 08, 2019
Contact name Hiroki Sasaki
Organization name National Cancer Center Reseach Institute
Street address Tukiji5-1-1
City Chuo-ku
State/province Tokyo
ZIP/Postal code 104-0045
Country Japan
 
Platforms (2)
GPL339 [MOE430A] Affymetrix Mouse Expression 430A Array
GPL340 [MOE430B] Affymetrix Mouse Expression 430B Array
Samples (20)
GSM1053494 Transformed 3T3 cells by mucAB 12_1
GSM1053495 Transformed 3T3 cells by mucAB 12_2
GSM1053496 Transformed 3T3 cells by mucAB 52_1
Relations
BioProject PRJNA183882

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42927_RAW.tar 41.1 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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