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Series GSE49223 Query DataSets for GSE49223
Status Public on Sep 24, 2013
Title Gene regulation by CBP-p300 in the lens placode - E9.5
Organism Mus musculus
Experiment type Expression profiling by array
Summary Wild type or CBP/p300 fx/fx; Le-Cre-positive (CBP/p300-/-) surface ectoderm from E9.5 mouse embryos was laser micodissected from three embryos of each genotype. Total RNA was purified, pooled for each genotype and triplicate samples were reverse transcribed and amplified using a NuGEN kit. cDNA was biotinylated and hybridized to Illumina Mouse6 v2.0 bead arrays.
 
Overall design Three wild type and three knockout embryos were used. The RNA from embryos of the same genotype was purified and pooled and triplicate samples were amplified and used for microarray analysis.
 
Contributor(s) Beebe DC, Huang J, Liu Y
Citation(s) 24038357
Submission date Jul 25, 2013
Last update date Jan 16, 2019
Contact name David Cy Beebe
E-mail(s) beebe@wustl.edu
Organization name Washington University School of Medicine
Department Ophthalmology and Visual Science
Lab Campus Box 8096
Street address 660 S. Euclid Ave.
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (6)
GSM1195543 WT2, E9.5
GSM1195544 WT3, E9.5
GSM1195545 WT1, E9.5
Relations
BioProject PRJNA213308

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49223_RAW.tar 15.8 Mb (http)(custom) TAR
GSE49223_non-normalized.txt.gz 3.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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