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Series GSE61366 Query DataSets for GSE61366
Status Public on Feb 02, 2015
Title Changes in cholesterol homeostasis and acute phase response following pulmonary exposure to multi-walled carbon nanotubes links carbon nanotube exposure to risk of cardiovascular disease
Organism Mus musculus
Experiment type Expression profiling by array
Summary Adverse lung effects in rodents following pulmonary exposure to multi-walled carbon nanotubes (MWCNT) are well documented. However, systemic effects are less understood. Prospective epidemiological studies have shown increased cardiovascular disease risk after pulmonary exposure to airborne particles, which has led to concerns that inhalation exposure to MWCNT might pose similar risks.
We used high-content genomics tools to compare hepatic responses after exposure to a short, entangled MWCNT to the hepatic responses after exposure to a long, stiffer MWCNT at the global transcriptomic level. Female C57BL/6 mice were exposed by single intratracheal instillation to 162 µg/mouse of a short MWCNT (NRCWE-26 (NC-7000), 847±102 nm in length) or long MWCNT (NM-401 (CP-0006-SG), 4048±366 nm in length). Liver tissues were harvested 24 h, 3 d and 28 d after exposure.
 
Overall design This experiment examined the pulmonary transcriptional response of female C57BL/6 mice exposed to NRCWE-26, a short multi-walled carbon nanotube, and NM-401, a long multi-walled carbon nanotube, at three doses: D1 (18 μg), D2 (54 μg), D3 (162 μg), and vehicle control. Each dose group was examined 1, 3 or 28 days post-exposure. Each dose group had 6 biological replicates. There were a total of 72 samples included in the final analysis using a two-color reference design.
 
Contributor(s) Søs Poulsen S, Saber AT, Mortensen A, Szarek J, Wu D, Williams A, Andersen O, Jacobsen NR, Yauk CL, Wallin H, Halappanavar S, Vogel U
Citation(s) 25620056
Submission date Sep 12, 2014
Last update date Feb 02, 2018
Contact name Sarah Søs Poulsen
E-mail(s) spo@nrcwe.dk
Phone 4539165225
Organization name The National Research Centre for the Working Environment
Street address Knud den Stores Vej 39B, 2.MF
City Roskilde
State/province Denmark
ZIP/Postal code 4000
Country Denmark
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (60)
GSM1503112 NCRWE-026_1_162 [793]
GSM1503113 NM-401_3_162 [700]
GSM1503114 NCRWE-026_3_162 [142]
Relations
BioProject PRJNA260884

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61366_RAW.tar 362.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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