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Series GSE71830 Query DataSets for GSE71830
Status Public on Oct 01, 2015
Title Activin/Nodal signaling supports retinal progenitor specification in a narrow time window during pluripotent stem cell differentiation to anterior neuroectoderm
Organism Mus musculus
Experiment type Expression profiling by array
Summary In this study, we used chemically-defined media to induce the in vitro differentiation of mouse embryonic stem cells (ESCs) towards eye field fates. Inhibition of Wnt/ß-Catenin signalling was sufficient to drive ESCs to telencephalic, but not retinal fates. Instead, retinal progenitors could be generated from competent differentiating mouse and human ESCs by the activation of Activin/Nodal signaling within a narrow temporal window corresponding to the emergence of primitive anterior neural progenitors. Our results reveal insights into the mechanisms of eye field specification and open new avenues towards the generation of retinal progenitors for translational medicine.
 
Overall design Gene expression was evaluated in sorted RAX::GFP-positive and -negative ES cells at 10 days of in vitro differentiation upon treatment with Wnt inhibitor and Activin A or Sonic Hedgehog Agonist; global profiles were compared to E12.5 mouse embryo cortex, hypothalamus/diencephalon and eye.
 
Contributor(s) Bertacchi M, Lupo G, Pandolfini L, Casarosa S, D'Onofrio M, Pedersen RA, Harris WA, Cremisi F
Citation(s) 26388287
Submission date Aug 07, 2015
Last update date Feb 02, 2018
Contact name Luca Pandolfini
E-mail(s) luca.pandolfini@iit.it
Organization name Istituto Italiano di Tecnologia - I
Department Center for Human Technologies
Street address Via Enrico Melen 83, Building B
City Genova
State/province Genova
ZIP/Postal code 16152
Country Italy
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (8)
GSM1846488 K/l-EB5_10DIV_WiAct_RaxN
GSM1846489 K/l-EB5_10DIV_WiAct_RaxP
GSM1846490 Mouse_Cortex_E12.5
Relations
BioProject PRJNA292163

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71830_RAW.tar 95.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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