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Series GSE74929 Query DataSets for GSE74929
Status Public on Feb 09, 2017
Title Epigenetic regulation of hematopoiesis by DNA methylation
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: RNA seq analysis from isolated zebrafish HSPCs at 48 hpf from control morpholino and dnmt3bb.1 morpholino injected embryos
 
Overall design HSPCs were isolated by FACS sorting using transgenic line Tg(kdrl:mApple, cmyb:GFP) as described by Bertrand et al 2010
Total RNA from isolated HSPCs at 48hpf
 
Contributor(s) Gore AV, Weinstein BM
Citation(s) 26814702
Submission date Nov 12, 2015
Last update date May 15, 2019
Contact name Aniket Gore
Organization name National Institute of child health and human development
Street address Bldg 6B center drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (4)
GSM1937945 Control_HSC3_RNA-Seq
GSM1937946 HSC_Control_RNA-Seq
GSM1937947 HSC_Mutant_RNA-Seq
Relations
BioProject PRJNA301934
SRA SRP066088

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74929_ANOVA_gene_rpkm.txt.gz 442.5 Kb (ftp)(http) TXT
GSE74929_Diff_Exp.txt.gz 971.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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