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Sample GSM1068294 Query DataSets for GSM1068294
Status Public on May 01, 2013
Title kn_16 weeks_non-fasted_rep_1 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: non-fasted
strain: C57BL/6J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 13W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2184.483333 0
ILMN_2721178 633.221875 0
ILMN_3033922 1423.204167 0
ILMN_3092673 4856.039583 0
ILMN_2816356 108.2395833 0.02506
ILMN_2808939 1634.701042 0
ILMN_2634564 497.44375 0
ILMN_2737647 82.15104167 0.23308
ILMN_2734484 484.78125 0
ILMN_2952292 149.44375 0
ILMN_2699078 70.09166667 0.68421
ILMN_1213681 320.8375 0
ILMN_2735413 705.5125 0
ILMN_2735415 864.9645833 0
ILMN_2891688 558.171875 0
ILMN_2637698 584.6583333 0
ILMN_2674228 277.9479167 0
ILMN_2601546 88.75833333 0.12281
ILMN_1230831 88.48333333 0.12531
ILMN_2848071 1388.25 0

Total number of rows: 25697

Table truncated, full table size 754 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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