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Sample GSM1071629 Query DataSets for GSM1071629
Status Public on Jan 29, 2013
Title Non Osteoclastogenic cell line_stimulated RANKL_2 days_rep1
Sample type RNA
 
Source name C8_RANKL stimulated_2 days
Organism Mus musculus
Characteristics cell line: C8
cell type: non-osteoclastogenic cells
stimuated with: purified recombinant RANKL (60ng/ml) for 2 days
Treatment protocol cells were stimulated for 2 days with purified recombinant RANKL (60ng/ml)
Growth protocol cells were plated on 60 mm tissue culture dishes at a density of 0.5 million in a culture medium consisting of 8 ml of Dulbecco's Modified Eagle Medium (DMEM, Life Technologies, Grand Island, NY, USA) supplemented with 10% Fetal Bovine Serum (FBS) and 10% antibiotics (164 IU/mL of penicillin G, 50 mg/ml of gentamicin, and 0.25 mg/ml of fungizone).
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Minikit, Germantown, MD, USA
Label biotin
Label protocol Ambion WT kit
 
Hybridization protocol FS450_0007
Scan protocol Affymetrix GeneChip Scanner 3000
Description C8 (1)
Data processing Expression Console
 
Submission date Jan 28, 2013
Last update date Sep 17, 2020
Contact name Maayan Inger
E-mail(s) maayan.barashi@mail.utoronto.ca
Organization name University of Toronto
Street address Fitzgerald Building 150 College Street, Room 221
City Toroto
State/province ON
ZIP/Postal code M5S 3E2
Country Canada
 
Platform ID GPL6246
Series (1)
GSE43811 CD109 plays a role in osteoclastogenesis.
Relations
Reanalyzed by GSE158149

Data table header descriptions
ID_REF
VALUE RMA, LIMMA

Data table
ID_REF VALUE
10338001 12.7
10338002 8.39
10338003 11.18
10338004 10.02
10338005 3.46
10338006 3.93
10338007 4.44
10338008 5.94
10338009 10.01
10338010 3.55
10338011 7.88
10338012 3.72
10338013 3.32
10338014 3.4
10338015 3.32
10338016 9.44
10338017 13.5
10338018 8.76
10338019 7.38
10338020 9.97

Total number of rows: 35545

Table truncated, full table size 490 Kbytes.




Supplementary file Size Download File type/resource
GSM1071629_MoGene1_070611W_MG04_C8_1_.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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