|
| Status |
Public on Aug 16, 2013 |
| Title |
genomic DNA from cerebral cortex 10 |
| Sample type |
genomic |
| |
|
| Source name |
genomic DNA from cerebral cortex
|
| Organism |
Homo sapiens |
| Characteristics |
age (yrs): 44
gender: female
disease status: autism
ethnicity: cauc
tissue: brain (cerebral cortex)
sentrix barcode: 4671848031
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was isolated using QIAgen Dneasy
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulfite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
UABbrain-10_2
|
| Data processing |
GenomeStudio and R
non_normalized data matrix contains unmethylated (signal A) and methylated (Signal B) signal intensities
|
| |
|
| Submission date |
Aug 15, 2013 |
| Last update date |
Aug 16, 2013 |
| Contact name |
Devin Absher |
| E-mail(s) |
dabsher@hudsonalpha.org
|
| Organization name |
HudsonAlpha Institute for Biotechnology
|
| Lab |
Devin Absher
|
| Street address |
601 Genome Way
|
| City |
Huntsville |
| ZIP/Postal code |
35806 |
| Country |
USA |
| |
|
| Platform ID |
GPL8490 |
| Series (2) |
| GSE49905 |
Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [brain] |
| GSE49909 |
Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape |
|
