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Sample GSM1273889 Query DataSets for GSM1273889
Status Public on Nov 24, 2014
Title WT 140d
Sample type RNA
 
Source name -B6/SJL
Organism Mus musculus
Characteristics cell type: Spinal cord FACS sorted adult FCRLS+ microglia
strain/genotype: B6SJL-Non-Tg
gender: female
age: 140d
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using mirVanaTM miRNA isolation kit (Ambion) according to the manufacturer’s protocol
Label NA
Label protocol MG400 custom Nanostring codesets
 
Hybridization protocol according to the manufacturer’s protocol
Scan protocol according to the manufacturer’s protocol
Data processing Data was proccessed using nSolver, normalized to Positive controls, Housekeeping genes and negative controls
 
Submission date Nov 22, 2013
Last update date Nov 24, 2014
Contact name Oleg Butovsky
E-mail(s) obutovsky@rics.bwh.harvard.edu
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL17979
Series (2)
GSE52671 MG400 profile of spinal cord microglia during disease progression in SOD mice
GSE52947 Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice

Data table header descriptions
ID_REF
VALUE Normalized mRNA transcripts copies per 100ng of total RNA

Data table
ID_REF VALUE
Cltc 625
Nuak1 123
Rtn1 37
Sesn1 96
Add1 49
Inpp4b 95
Adcyap1r1 3
Npnt 50
Unc13a 7
Gm4392 4
4921517D22Rik 457
Csf1r 1962
P2rx7 66
Arhgap12 62
Flot2 9
Rap1gds1 142
Hvcn1 69
Ryk 17
Synj1 35
Abi1 150

Total number of rows: 400

Table truncated, full table size 3 Kbytes.




Supplementary file Size Download File type/resource
GSM1273889_20120910_sod_kin_mg_400_01_10.RCC.gz 5.0 Kb (ftp)(http) RCC
Processed data included within Sample table

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