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Sample GSM1276473 Query DataSets for GSM1276473
Status Public on Nov 24, 2014
Title female sod155-/- s.c.
Sample type RNA
 
Source name Mouse -B6/SJL-mSOD1G93A-miR-155-/- (female)
Organism Mus musculus
Characteristics cell type: Spinal cord FACS sorted adult FCRLS+ microglia
strain/genotype: B6SJL-Tg(SOD1-G93A)1Gur/J / miR-155-/-
gender: female
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using mirVanaTM miRNA isolation kit (Ambion) according to the manufacturer’s protocol
Label NA
Label protocol MG400 custom Nanostring codesets
 
Hybridization protocol according to the manufacturer’s protocol
Scan protocol according to the manufacturer’s protocol
Data processing Data was proccessed using nSolver, normalized to Positive controls, Housekeeping genes and negative controls
 
Submission date Nov 27, 2013
Last update date Nov 24, 2014
Contact name Oleg Butovsky
E-mail(s) obutovsky@rics.bwh.harvard.edu
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL18002
Series (2)
GSE52803 MG400 profile of microglia from SOD miR155-KO mice
GSE52947 Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice

Data table header descriptions
ID_REF
VALUE Normalized mRNA transcripts copies per 100ng of total RNA

Data table
ID_REF VALUE
Cltc 346
Nuak1 94
Rtn1 13
Sesn1 53
Add1 46
Inpp4b 49
Adcyap1r1 5
Npnt 44
Unc13a 6
Ank2///Gm4392 3
Golm1///4921517D22Rik 298
Csf1r 1369
P2rx7 49
Arhgap12 47
Flot2 9
Rap1gds1 101
Hvcn1 82
Ryk 14
Synj1 38
Abi1 118

Total number of rows: 400

Table truncated, full table size 3 Kbytes.




Supplementary file Size Download File type/resource
GSM1276473_20121121_oleg_mg_oleg_11_21_12_10.RCC.gz 4.8 Kb (ftp)(http) RCC
Processed data included within Sample table

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