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Sample GSM1276727 Query DataSets for GSM1276727
Status Public on Aug 18, 2014
Title Ad Libitum 7
Sample type RNA
 
Source name Mouse epididymal fat
Organism Mus musculus
Characteristics strain: C57BL6/J
age: 8 months
tissue: Liver
Sex: Male
treatment: Ad Libitum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from 25 mg of liver in each sample using Qiagen Rneasy kit following manufacturer’s protocol. RNA quantity was assessed by Nanodrop and RNA quality was assessed by Agilent Bioanalyzer.
Label biotin
Label protocol Biotinylated cRNA were prepared using Ambion kit- Illumina TotalPrep RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description AL07
Data processing Data was processed in R by log2 transformation and z-normalization
 
Submission date Nov 29, 2013
Last update date Aug 18, 2014
Contact name Wilson Chun Yim Fok
E-mail(s) wilson.fok@wustl.edu
Organization name Washington University in St. Louis
Department Hematology
Street address 660 S Euclid Ave
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6887
Series (1)
GSE52825 Short-term rapamycin treatment in mice have few effects on the transcriptome of white adipose tissue compared to dietary restriction

Data table header descriptions
ID_REF
VALUE log2 transformation and z-normalization

Data table
ID_REF VALUE
ILMN_2417611 -0.545505844
ILMN_2762289 -0.432998403
ILMN_2896528 4.017891981
ILMN_2721178 1.998791623
ILMN_2458837 -0.551508671
ILMN_3033922 3.360471077
ILMN_3092673 4.966041591
ILMN_1230777 4.199153848
ILMN_1246069 3.043523093
ILMN_1232042 -0.423126674
ILMN_1243193 1.477879439
ILMN_2524361 -0.431897928
ILMN_1242440 -0.518235715
ILMN_1233188 0.353220255
ILMN_2543688 2.392910421
ILMN_1259789 0.113071419
ILMN_2816356 -0.474368054
ILMN_1224596 0.336017104
ILMN_1233643 -0.481199285
ILMN_2808939 0.848682539

Total number of rows: 45281

Table truncated, full table size 1134 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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