|
| Status |
Public on Nov 03, 2014 |
| Title |
genomic DNA from sample S2 |
| Sample type |
genomic |
| |
|
| Source name |
normal adjacent tissue
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: normal adjacent tissue
disease state: normal
gender: male
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted and purifiedusing QIAamp DNA Mini Kit according to standard instructions
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Data processing |
BeadStudio software 2011.1
|
| |
|
| Submission date |
Nov 29, 2013 |
| Last update date |
Nov 03, 2014 |
| Contact name |
xufeng li |
| E-mail(s) |
lixufeng1984@hotmail.com
|
| Phone |
+8615018731689
|
| Organization name |
Southern Medical University
|
| Department |
oncology center of zhujiang hospital
|
| Street address |
gongye avenue 253
|
| City |
guangzhou |
| State/province |
guangdong |
| ZIP/Postal code |
510282 |
| Country |
China |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE52826 |
the whole-genome methylation profile of esophageal squamous cell carcinoma |
|
