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Sample GSM1399891 Query DataSets for GSM1399891
Status Public on May 29, 2014
Title Genomic DNA from whole blood TWPID8368.Beta
Sample type genomic
 
Source name Whole blood
Organism Homo sapiens
Characteristics tissue: blood
gender: Female
age: 66.09445585
disease state: Normal
27k chip: 4720865007
order on 27k chip: B
twin: Family 2 Singleton
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted and purified from whole blood samples
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Family 2 Singleton
Data processing BeadStudio software for 27k data.
 
Submission date May 28, 2014
Last update date May 29, 2014
Contact name Pei-Chien Tsai
E-mail(s) pei-chien.tsai@kcl.ac.uk
Organization name King's College London
Department Twin Research and Genetic Epidemiology
Street address 3rd Floor South Wing Block D, St Thomas’ Campus, Lambeth Palace Road
City London
ZIP/Postal code SE1 7EH
Country United Kingdom
 
Platform ID GPL8490
Series (1)
GSE58045 Epigenome-Wide Scans Identify Differentially Methylated Regions for Age and Age-Related Phenotypes in a Healthy Ageing Population

Data table header descriptions
ID_REF
VALUE Average Beta
TWPID8368.Detection.Pval

Data table
ID_REF VALUE TWPID8368.Detection.Pval
cg00000292 0.8124568 3.678e-38
cg00002426 0.8421053 3.678e-38
cg00003994 0.05717957 3.678e-38
cg00005847 0.1423304 3.678e-38
cg00006414 0.1162518 3.678e-38
cg00007981 0.03859944 3.678e-38
cg00008493 0.9698523 3.678e-38
cg00008713 0.0296983 3.678e-38
cg00009407 0.01809779 3.678e-38
cg00010193 0.5731915 3.678e-38
cg00011459 0.9368848 3.678e-38
cg00012199 0.02399945 3.678e-38
cg00012386 0.04136181 3.678e-38
cg00012792 0.03707576 3.678e-38
cg00013618 0.8147534 3.678e-38
cg00014085 0.02365781 3.678e-38
cg00014837 0.8037013 3.678e-38
cg00015770 0.149455 3.678e-38
cg00016968 0.8419813 3.678e-38
cg00019495 0.1827321 3.678e-38

Total number of rows: 27578

Table truncated, full table size 845 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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