|
| Status |
Public on Jul 12, 2014 |
| Title |
term placenta_310 |
| Sample type |
genomic |
| |
|
| Source name |
term placenta
|
| Organism |
Homo sapiens |
| Characteristics |
jury: 4
maternal age (years): 27.78
gestational age at delivery (weeks): 32.57
maternal race: White
nulliparous: 0
pre-pregancy bmi: 26.68
systolic bp <20 weeks (mmhg): 123
diastolic bp <20 weeks (mmhg): 77
systolic bp at delivery (mmhg): 152
diastolic bp at delivery (mmhg): 95
uric acid (mg/dl): 6.6
fetal sex: Male
tissue: placenta
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted using the Qiagen Dneasy Blood and Tissue Kit according to standard instructions.
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Data processing |
GenomeStudio software v1.1
Data tables contain normalized log (methylated/unmethylated). Raw data with Unmethylated and methylated signal intensities are available on the series record.
|
| |
|
| Submission date |
Jul 09, 2014 |
| Last update date |
Jul 12, 2014 |
| Contact name |
David Peter G. Peters |
| E-mail(s) |
dgp6@pitt.edu
|
| Organization name |
University of Pittsburgh/Magee-Womens Research Institute
|
| Department |
Department of Obstetrics, Gynecology and Reproductive Sciences
|
| Street address |
204 Craft Avenue
|
| City |
Pittsburgh |
| State/province |
PA |
| ZIP/Postal code |
15213 |
| Country |
USA |
| |
|
| Platform ID |
GPL8490 |
| Series (1) |
| GSE59274 |
Comprehensive Analysis of Preeclampsia-Associated DNA Methylation in the Placenta |
|
