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Sample GSM1562919 Query DataSets for GSM1562919
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC1._.INI88)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.268221724
10_at 2.127123416
100_at 3.981410008
1000_at 11.21701604
10000_at 5.610720982
100009676_at 2.099042311
10001_at 7.330196935
10002_at 2.36208477
10003_at 2.612892281
10004_at 2.229579856
100048912_at 2.184665273
100049716_at 2.462054651
10005_at 5.240168885
10006_at 9.051451274
10007_at 10.19350859
10008_at 2.417334534
10009_at 6.464039331
100093630_at 9.45914105
1001_at 8.38484855
10010_at 7.081634938

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562919_MD04_ARN0004_s1h1_U133p2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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