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Sample GSM1562920 Query DataSets for GSM1562920
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC1._.INI89)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 3.929143713
10_at 2.139010934
100_at 3.396721831
1000_at 10.5850652
10000_at 5.27287042
100009676_at 2.10907749
10001_at 6.655126516
10002_at 2.396044104
10003_at 2.662087532
10004_at 2.253463624
100048912_at 2.198654777
100049716_at 3.161046892
10005_at 4.908673053
10006_at 8.36906765
10007_at 9.215117036
10008_at 2.654799423
10009_at 7.046324758
100093630_at 8.526319511
1001_at 8.018209113
10010_at 7.344227061

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562920_MD04_ARN0005_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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