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Sample GSM1562927 Query DataSets for GSM1562927
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC2._.INI51)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.257592549
10_at 2.156044828
100_at 3.208933131
1000_at 8.70035956
10000_at 4.96921473
100009676_at 2.128065974
10001_at 7.806086369
10002_at 2.429721842
10003_at 8.87525963
10004_at 2.273780653
100048912_at 2.234670624
100049716_at 2.421308163
10005_at 5.016308124
10006_at 8.814877393
10007_at 9.037663026
10008_at 2.41660645
10009_at 7.397648395
100093630_at 8.641097768
1001_at 3.405981244
10010_at 8.336131893

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562927_MD13_ARN0004_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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