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Sample GSM1562942 Query DataSets for GSM1562942
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hNA._.INI27)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.422444116
10_at 2.15017542
100_at 5.738022687
1000_at 4.318617379
10000_at 5.867272034
100009676_at 2.1235898
10001_at 7.767852684
10002_at 2.43559058
10003_at 2.714516325
10004_at 2.26881857
100048912_at 2.220258335
100049716_at 2.421747161
10005_at 5.283809313
10006_at 8.416431896
10007_at 3.445035386
10008_at 2.417882329
10009_at 7.180665397
100093630_at 10.50826674
1001_at 7.939722317
10010_at 7.242078923

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562942_INI27_s1p1h1_.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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