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Sample GSM15684 Query DataSets for GSM15684
Status Public on Jan 27, 2004
Title CurrentSmoker 1
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) aspira@bu.edu
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1716.700 0.000468
1053_at 30.500 0.621816
117_at 25.200 0.541184
121_at 562.900 0.035163
1255_g_at 28.500 0.250724
1294_at 145.800 0.011447
1316_at 70.700 0.089405
1320_at 12.900 0.679170
1405_i_at 33.600 0.658380
1431_at 68.400 0.107301
1438_at 29.700 0.458816
1487_at 145.600 0.234557
1494_f_at 123.600 0.014937
1598_g_at 517.300 0.019304
160020_at 133.300 0.024711
1729_at 363.800 0.000388
1773_at 23.200 0.458816
177_at 95.400 0.027860
179_at 616.400 0.011447
1861_at 113.300 0.048995

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15684.CEL.gz 3.1 Mb (ftp)(http) CEL

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