|
| Status |
Public on Jan 01, 2016 |
| Title |
Preneoplastic foci_6033081014_K (I) |
| Sample type |
RNA |
| |
|
| Source name |
Preneoplastic foci
|
| Organism |
Rattus norvegicus |
| Characteristics |
tissue: Liver
cell type: Preneoplastic foci
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent and Mirvana Kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
6033081014_K
replicate 3
|
| Data processing |
The data were normalized using quantile normalization with Illumina BeadStudio 3.0.19.0 software (Illumina Inc) and BRB Array Tools (Version 4.2.0)
|
| |
|
| Submission date |
Jun 26, 2015 |
| Last update date |
Jan 01, 2016 |
| Contact name |
AMEDEO COLUMBANO |
| E-mail(s) |
columbano@unica.it
|
| Organization name |
UNIVERSITA' DEGLI STUDI DI CAGLIARI
|
| Department |
DIPARTIMENTO DI SCIENZE BIOMEDICHE
|
| Street address |
VIA PORVELL 4
|
| City |
CAGLIARI |
| State/province |
CA |
| ZIP/Postal code |
09125 |
| Country |
Italy |
| |
|
| Platform ID |
GPL6101 |
| Series (2) |
| GSE70320 |
Cytokeratin-19 positivity is acquired along cancer progression and does not predict cell origin in rat hepatocarcinogenesis (I) |
| GSE70322 |
Cytokeratin-19 positivity is acquired along cancer progression and does not predict cell origin in rat hepatocarcinogenesis |
|
