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Sample GSM1810206 Query DataSets for GSM1810206
Status Public on Jul 20, 2015
Title 12-9-2013, Individual #3 SAMPLE 244
Sample type RNA
 
Source name Reduction mammoplasty
Organism Homo sapiens
Characteristics disease state: Luminal progenitor
Treatment protocol n/a
Growth protocol n/a
Extracted molecule total RNA
Extraction protocol Enzymatic tissue digest
Label SYBR Green
Label protocol Single-cell gene expression using SsoFast EvaGreen SuperMix with low Rox on the BioMark system, advanced protocol 41
 
Hybridization protocol n/a
Scan protocol n/a
Description Luminal progenitor
Data processing Data analyzed using Fluidigm real-time PCR analysis software and custom algorithms in R statistical software
 
Submission date Jul 06, 2015
Last update date Jul 20, 2015
Contact name Devon Lawson
E-mail(s) Devon.Lawson@ucsf.edu
Organization name UCSF
Department Anatomy
Lab Zena Werb
Street address 513 Parnassus Ave Hsw 1301
City San Francisco
State/province California
ZIP/Postal code 94143
Country USA
 
Platform ID GPL20665
Series (2)
GSE70554 Single-cell analysis reveals a stem cell program in human metastatic breast cancer cells (Human patients - mammary cells)
GSE70555 Single-cell analysis reveals a stem cell program in human metastatic breast cancer cells

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
ACTA2 -1.282179177
AKT1 0.37330797
AR -3.144131472
BCL2 -0.505816752
BCL2L1 -9.329369418
BMI1 -2.634440692
BRCA1
CASP3
CAV1 -4.421264477
CAV2 -3.028196195
CCNB1
CCND1
CCNE1 6.386675103
MME 0.516568472
CD24 6.528866021
CD44
THY1 -0.409413333
CDH1 0.863799149
CDH3 -2.300766124
CDK1

Total number of rows: 111

Table truncated, full table size 1 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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