|
| Status |
Public on Dec 11, 2007 |
| Title |
squamous cell carcinoma of the cervix SCC__CS-196T |
| Sample type |
RNA |
| |
|
| Source name |
invasive squamous cell carcinoma of the cervix
|
| Organism |
Homo sapiens |
| Characteristics |
frank carcinoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted from 1000-5000 laser capture microdissected cells using the Arcturus PicoPure RNA isolation Kit (KIT0202).
|
| Label |
biotin
|
| Label protocol |
20-100 ng of total RNA was processed to produce biotinylated cRNA targets, using two rounds of T7-base RNA amplification with the Arcturus RiboAmp kit (KIT0201).
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
squamous cell carcinoma of the cervix SCC__CS-196T
|
| Data processing |
Ann Arbor quantile-normalized trimmed-mean method
|
| |
|
| Submission date |
May 15, 2007 |
| Last update date |
Feb 26, 2020 |
| Contact name |
Rork Kuick |
| E-mail(s) |
rork@umich.edu
|
| Phone |
734-936-9241
|
| Organization name |
University of Michigan
|
| Street address |
University of Michigan, SPH II, 1415 Washington Heights, Room M2533
|
| City |
Ann Arbor |
| State/province |
MI |
| ZIP/Postal code |
48109-2029 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE7803 |
Human pre-invasive and invasive cervical squamous cell carcinomas and normal cervical epithelia |
|
| Relations |
| Reanalyzed by |
GSE145976 |
