NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2040340 Query DataSets for GSM2040340
Status Public on Jun 21, 2016
Title Cells treated with scrambled RNA sample 1 replicate 3
Sample type RNA
 
Source name A549 Lung Adenocarcinoma Cell Line
Organism Homo sapiens
Characteristics cell line: A549
Extracted molecule total RNA
Extraction protocol none provided by submitter
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Summarization was performed using RMA
 
Submission date Jan 15, 2016
Last update date Jun 21, 2016
Contact name Juan Pablo Romero
E-mail(s) jromeror@unav.es
Organization name CIMA
Department Hemato-Oncology
Lab Advanced Genomics
Street address Av. de Pío XII, 55
City Pamplona
State/province Navarra
ZIP/Postal code 31008
Country Spain
 
Platform ID GPL21339
Series (1)
GSE76902 EventPointer: An effective identification of alternative splicing events using junction arrays

Data table header descriptions
ID_REF
VALUE Log2 normalized values using aroma.affymetrix

Data table
ID_REF VALUE
ENSG00000000003_2_P1 8.266416118
ENSG00000000003_2_P2 5.049489639
ENSG00000000003_2_Ref 9.219431628
ENSG00000000003_4_P1 6.52617934
ENSG00000000003_4_P2 8.936841709
ENSG00000000003_4_Ref 8.266416118
ENSG00000000005_1_P1 4.115352009
ENSG00000000005_1_P2 3.554275121
ENSG00000000005_1_Ref 3.219616114
ENSG00000000419_2_P1 7.606432098
ENSG00000000419_2_P2 9.015687785
ENSG00000000419_2_Ref 8.683667802
ENSG00000000419_6_P1 8.480489833
ENSG00000000419_6_P2 9.148758952
ENSG00000000419_6_Ref 7.606432098
ENSG00000000419_7_P1 2.006392857
ENSG00000000419_7_P2 9.936916633
ENSG00000000419_7_Ref 9.015687785
ENSG00000000457_2_P1 5.143881251
ENSG00000000457_2_P2 7.361909916

Total number of rows: 220662

Table truncated, full table size 7227 Kbytes.




Supplementary file Size Download File type/resource
GSM2040340_2014-09-19_WTPlus_HT_HTA2_SRSF1_SCR_1_3.CEL.gz 23.1 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap