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Sample GSM205945 Query DataSets for GSM205945
Status Public on Aug 08, 2008
Title cerebrum_PS-/-_ 10d_rep2
Sample type RNA
 
Source name PS-/- cerebrum at 10 days
Organism Mus musculus
Characteristics 10 days old prosaposin knockout mice, cerebrum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Prosaposin null mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 7580.7 P 0.000244
1415671_at 29535.3 P 0.000244
1415672_at 14833.5 P 0.000244
1415673_at 2702.5 P 0.000732
1415674_a_at 6380.4 P 0.000244
1415675_at 4364.6 P 0.000244
1415676_a_at 20407.6 P 0.000244
1415677_at 4788.8 P 0.000244
1415678_at 9523.8 P 0.000244
1415679_at 9470.6 P 0.000244
1415680_at 2337.9 P 0.000244
1415681_at 6755.3 P 0.000244
1415682_at 1648.8 P 0.000244
1415683_at 7540.1 P 0.000244
1415684_at 1421.1 P 0.000244
1415685_at 2843.3 P 0.000244
1415686_at 6261.1 P 0.000244
1415687_a_at 964.2 P 0.000244
1415688_at 10174.3 P 0.000244
1415689_s_at 1228.7 P 0.000732

Total number of rows: 45101

Table truncated, full table size 1236 Kbytes.




Supplementary file Size Download File type/resource
GSM205945.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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