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Sample GSM205995 Query DataSets for GSM205995
Status Public on Aug 08, 2008
Title cerebrum_WT_20d_rep2
Sample type RNA
 
Source name WILDTYPE cerebrum at 20 days
Organism Mus musculus
Characteristics 20 days normal mice, cerebrum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Wildtype control mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 4981.1 P 0.000244
1415671_at 28349.4 P 0.000244
1415672_at 25597.9 P 0.000244
1415673_at 2911.3 P 0.000732
1415674_a_at 5571.3 P 0.000244
1415675_at 3652 P 0.000244
1415676_a_at 19187.2 P 0.000244
1415677_at 5677.1 P 0.000732
1415678_at 10078.9 P 0.000244
1415679_at 12110.2 P 0.000244
1415680_at 1584.1 P 0.001953
1415681_at 5330.1 P 0.000244
1415682_at 1298.6 P 0.001953
1415683_at 8871.4 P 0.000244
1415684_at 1544.1 P 0.000244
1415685_at 2614.9 P 0.000244
1415686_at 4728.7 P 0.000244
1415687_a_at 34393.4 P 0.000244
1415688_at 9385.2 P 0.000244
1415689_s_at 928.8 P 0.00415

Total number of rows: 45101

Table truncated, full table size 1240 Kbytes.




Supplementary file Size Download File type/resource
GSM205995.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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