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Sample GSM212300 Query DataSets for GSM212300
Status Public on Aug 04, 2008
Title P238 lenalidomide pre-treatment
Sample type RNA
 
Source name human myeloma cell P238 lenalidomide pre-treatment
Organism Homo sapiens
Characteristics human myeloma cell P238 lenalidomide pre-treatment
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit(50)
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard affymetrix protocol
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using GeneChip Scanner 3000
Description human myeloma cell P238 lenalidomide pre-treatment
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Jul 20, 2007
Last update date Aug 14, 2011
Contact name Yiming Zhou
E-mail(s) yzhou@uams.edu
Phone (501)296-1503 1413
Organization name Myeloma Institute for Research and Therapy
Street address 4301 West Markham St., Slot 776
City Little Rock
State/province AR
ZIP/Postal code 72205
Country USA
 
Platform ID GPL8300
Series (1)
GSE8546 Gene Expression Changes in Myeloma Cells Following Short Term In-vivo Drug Exposure

Data table header descriptions
ID_REF probeset ID
VALUE normalized signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
AFFX-MurIL2_at 205.2 A
AFFX-MurIL10_at 335.8 A
AFFX-MurIL4_at 61.2 A
AFFX-MurFAS_at 79.1 A
AFFX-BioB-5_at 835.9 P
AFFX-BioB-M_at 1459.0 P
AFFX-BioB-3_at 403.9 A
AFFX-BioC-5_at 2028.3 P
AFFX-BioC-3_at 1334.3 P
AFFX-BioDn-5_at 1997.5 P
AFFX-BioDn-3_at 11212.0 P
AFFX-CreX-5_at 22282.6 P
AFFX-CreX-3_at 32702.4 P
AFFX-BioB-5_st 212.3 A
AFFX-BioB-M_st 59.9 A
AFFX-BioB-3_st 65.2 A
AFFX-BioC-5_st 68.0 A
AFFX-BioC-3_st 16.2 A
AFFX-BioDn-5_st 162.4 A
AFFX-BioDn-3_st 526.2 A

Total number of rows: 12625

Table truncated, full table size 214 Kbytes.




Supplementary file Size Download File type/resource
GSM212300.CEL.gz 2.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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