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Sample GSM225349 Query DataSets for GSM225349
Status Public on Sep 01, 2007
Title D02 0h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1848.35 P 0.0012475
AFFX-BioB-M_at 2927.42 P 9.4506e-05
AFFX-BioB-3_at 1568.67 P 0.000581214
AFFX-BioC-5_at 6658.58 P 0.00010954
AFFX-BioC-3_at 3705.17 P 7.00668e-05
AFFX-BioDn-5_at 4972.54 P 4.42873e-05
AFFX-BioDn-3_at 31748.1 P 9.4506e-05
AFFX-CreX-5_at 44224.1 P 4.42873e-05
AFFX-CreX-3_at 63161.6 P 4.42873e-05
AFFX-DapX-5_at 130.958 A 0.262827
AFFX-DapX-M_at 35.2092 A 0.686277
AFFX-DapX-3_at 28.3117 A 0.937071
AFFX-LysX-5_at 87.9912 A 0.544587
AFFX-LysX-M_at 64.2046 A 0.659339
AFFX-LysX-3_at 20.6301 A 0.699394
AFFX-PheX-5_at 17.7398 A 0.891021
AFFX-PheX-M_at 4.67704 A 0.976071
AFFX-PheX-3_at 148.113 A 0.440646
AFFX-ThrX-5_at 36.928 A 0.794268
AFFX-ThrX-M_at 120.41 A 0.559354

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225349.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225349.EXP.gz 475 b (ftp)(http) EXP
Processed data included within Sample table

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