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Status
Public on Aug 11, 2006
Title
Mg++ deficient 13
Sample type
RNA
Source name
Left lateral lobe of liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Sample was taken at necropsy and RNA was extracted using a Trizol followed by RNeasy cleanup. Targets were produced using standard Affymetrix procedures from approximately 5 microgram of total RNA.
Submission date
May 10, 2004
Last update date
May 28, 2005
Contact name
Anthony Masiello
E-mail(s)
anthony.masiello@pharma.novartis.com Phone
862-778-5847
Organization name
Novartis
Street address
One Health Plaza
City
East Hanover
State/province
NJ
ZIP/Postal code
07936
Country
USA
Platform ID
GPL85 Series (1)
GSE1401 Mg++ supplemented and deficient diets
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurFAS_at
1.123478
A
.712257
AFFX-BioB-3_at
69.267746
P
.000095
AFFX-BioC-5_at
280.043915
P
.00007
AFFX-BioDn-5_at
224.512238
P
.000662
AFFX-BioDn-3_at
990.868225
P
.000044
AFFX-BioB-M_st
16.310099
A
.062929
AFFX-BioB-3_st
1.424726
A
.876428
AFFX-BioDn-3_st
21.110243
A
.083592
AFFX-CreX-3_st
2.447702
A
.724854
AFFX-DapX-M_at
5.882364
A
.327079
AFFX-LysX-3_at
.571852
A
.617401
AFFX-ThrX-5_at
7.432602
A
.102165
AFFX-TrpnX-5_at
.843978
A
.876428
AFFX-TrpnX-M_at
.29906
A
.993817
AFFX-TrpnX-3_at
.281405
A
.921998
AFFX_Rat_GAPDH_M_at
1633.529785
P
.000044
AFFX_Rat_Hexokinase_5_at
2.075393
A
.783476
AFFX_Rat_Hexokinase_M_at
3.293118
A
.5
AFFX_Rat_Hexokinase_3_at
9.169548
A
.262827
AFFX_Rat_beta-actin_5_at
342.211487
P
.000095
8799 282 Kbytes .Supplementary data files not provided
