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Sample GSM2265747 Query DataSets for GSM2265747
Status Public on Jan 20, 2017
Title epidermis_D51_old_65y
Sample type RNA
 
Source name human epidermis, inner forearm
Organism Homo sapiens
Characteristics tissue: epidermis
gender: female
age: 65
group: old
Treatment protocol no treatment
Extracted molecule total RNA
Extraction protocol Suction blisters were obtained as described previously from the inner forearms of 28 young (20 to 25 years) and 54 old (aged between 55 and 66 years) healthy female volunteers (Sudel et al Photochem Photobiol 2003). Suction blister roofs were taken and immediately stored at -80°C . For transcriptomics analysis the suction blister epidermis samples were homogenized using a ball mill. RNA was extracted using RNeasy Fibrous Tissue Mini Kit (Qiagen) according to manufacturer's instructions
Label Cy3
Label protocol Agilent Whole Human Genome Oligo Microarrays 8x60K V2 Kit
 
Hybridization protocol done by Genomics Services from Miltenyi Biotec
Scan protocol done by Genomics Services from Miltenyi Biotec
Description epidermis_D51_old_65y
Data processing Agilent Feature Extraction Software; data processing using LIMMA for R
 
Submission date Aug 09, 2016
Last update date Jan 20, 2017
Contact name Nicola Zamboni
Organization name ETH Zurich
Department Institute for Molecular Systems Biology
Lab Zamboni Lab
Street address Auguste-Piccard-Hof 1
City Zürich
State/province Zurich
ZIP/Postal code 8049
Country Switzerland
 
Platform ID GPL17077
Series (1)
GSE85358 Metabolic alterations in aged human skin in vivo

Data table header descriptions
ID_REF
VALUE normalized signal intensities

Data table
ID_REF VALUE
A_32_P94 6.772834263
A_23_P300600 5.841113737
A_23_P59613 7.315034508
A_23_P47682 6.688436949
A_23_P254741 10.97458847
A_33_P3775848 6.864222371
A_23_P50081 13.52884614
A_23_P50638 6.615442788
A_23_P88580 9.453373122
A_33_P3316539 8.334658811
A_23_P24903 9.040597409
A_24_P386323 9.414537278
A_23_P15692 8.399401697
A_24_P42501 7.306468158
A_23_P111297 9.216383486
A_33_P3279730 7.396005392
A_19_P00316453 8.381758368
A_23_P128215 5.957532763
A_23_P402787 10.0875634
A_23_P414308 10.01765345

Total number of rows: 20672

Table truncated, full table size 507 Kbytes.




Supplementary file Size Download File type/resource
GSM2265747_253949420969_S01_GE1_107_Sep09_1_1.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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