NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM226969 Query DataSets for GSM226969
Status Public on Sep 01, 2008
Title Mouse immune cells time 4 hrs after treatment (mcw016)
Sample type RNA
 
Source name mouse immune cells at time 4 hrs after treatment
Organism Mus musculus
Characteristics BL6 Wild type
Extracted molecule total RNA
Extraction protocol See manuscript
Label Standard Affymetrix label
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description See manuscript
Data processing MAS 5.0 as implemented in GCOS
 
Submission date Sep 05, 2007
Last update date Aug 28, 2018
Contact name David Finkelstein
E-mail(s) david.finkelstein@stjude.org
Phone 9014953931
Organization name St Jude Children's Research Hospital
Department Computational Biology
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL1261
Series (1)
GSE8960 The TLR2/NOD2/RICK signaling axis regulates stimulus-specific IL-10 production
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Absent vs Present
DETECTION P-VALUE Probability that signal is noise

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 983.157 P 0.000581214
AFFX-BioB-M_at 1657.02 P 4.42873e-05
AFFX-BioB-3_at 1075.92 P 5.16732e-05
AFFX-BioC-5_at 2971.42 P 4.42873e-05
AFFX-BioC-3_at 4057.58 P 4.42873e-05
AFFX-BioDn-5_at 6896.57 P 4.42873e-05
AFFX-BioDn-3_at 11335.3 P 4.42873e-05
AFFX-CreX-5_at 37575.9 P 5.16732e-05
AFFX-CreX-3_at 44872.1 P 4.42873e-05
AFFX-DapX-5_at 1625.25 P 6.02111e-05
AFFX-DapX-M_at 2454.32 P 0.00010954
AFFX-DapX-3_at 3158.18 P 4.42873e-05
AFFX-LysX-5_at 170.99 P 0.000296708
AFFX-LysX-M_at 234.476 P 0.00141043
AFFX-LysX-3_at 599.483 P 6.02111e-05
AFFX-PheX-5_at 241.158 P 6.01289e-05
AFFX-PheX-M_at 382.306 P 0.000126798
AFFX-PheX-3_at 329.237 P 4.42873e-05
AFFX-ThrX-5_at 302.775 P 0.000445901
AFFX-ThrX-M_at 518.784 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1373 Kbytes.




Supplementary file Size Download File type/resource
GSM226969.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap