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Sample GSM243896 Query DataSets for GSM243896
Status Public on Oct 01, 2012
Title T11 tonsil plasma cells_GPL91
Sample type RNA
 
Source name T11 tonsil plasma cells_GPL91
Organism Homo sapiens
Characteristics T11 tonsil plasma cells_GPL91
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit(50)
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard affymetrix protocol
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using GeneChip Scanner 3000
Description human peripheral blood B cells T11 tonsil plasma cells_GPL91
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Nov 20, 2007
Last update date Oct 01, 2012
Contact name Yiming Zhou
E-mail(s) yzhou@uams.edu
Phone (501)296-1503 1413
Organization name Myeloma Institute for Research and Therapy
Street address 4301 West Markham St., Slot 776
City Little Rock
State/province AR
ZIP/Postal code 72205
Country USA
 
Platform ID GPL8300
Series (1)
GSE9656 Gene Expression Profiling Reveals Biological Insights into the Pathophysiology of Waldenströms macroglobulinemia

Data table header descriptions
ID_REF probeset ID
VALUE normalized signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
AFFX-MurIL2_at 237.4 A
AFFX-MurIL10_at 464.1 A
AFFX-MurIL4_at 376.8 A
AFFX-MurFAS_at 1146.2 A
AFFX-BioB-5_at 7024.5 P
AFFX-BioB-M_at 8730.2 P
AFFX-BioB-3_at 5914.3 P
AFFX-BioC-5_at 20048.1 P
AFFX-BioC-3_at 23253.9 P
AFFX-BioDn-5_at 16866.1 P
AFFX-BioDn-3_at 59617.7 P
AFFX-CreX-5_at 133331.7 P
AFFX-CreX-3_at 134536.7 P
AFFX-BioB-5_st 2143.4 A
AFFX-BioB-M_st -57.6 A
AFFX-BioB-3_st -2209.4 A
AFFX-BioC-5_st -1485.1 A
AFFX-BioC-3_st -943.6 A
AFFX-BioDn-5_st 5164.1 A
AFFX-BioDn-3_st 3789.0 A

Total number of rows: 12625

Table truncated, full table size 221 Kbytes.




Supplementary file Size Download File type/resource
GSM243896.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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