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GEO accession:
Sample GSM249379
Query DataSets for GSM249379
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair D.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
128.06
P
0.00687065
AFFX-BioB-M_at
212.902
P
0.000509415
AFFX-BioB-3_at
138.427
P
0.00110197
AFFX-BioC-5_at
399.752
P
9.4506e-05
AFFX-BioC-3_at
228.614
P
0.00010954
AFFX-BioDn-5_at
194.976
P
0.000445901
AFFX-BioDn-3_at
2370.87
P
9.4506e-05
AFFX-CreX-5_at
2942.14
P
4.42873e-05
AFFX-CreX-3_at
5262.93
P
4.42873e-05
AFFX-DapX-5_at
3.89726
A
0.48511
AFFX-DapX-M_at
23.7861
A
0.108979
AFFX-DapX-3_at
2.7341
A
0.910522
AFFX-LysX-5_at
9.34379
A
0.455413
AFFX-LysX-M_at
15.487
A
0.699394
AFFX-LysX-3_at
1.46934
A
0.814869
AFFX-PheX-5_at
1.98294
A
0.910522
AFFX-PheX-M_at
1.9308
A
0.937071
AFFX-PheX-3_at
12.143
A
0.455413
AFFX-ThrX-5_at
9.57606
A
0.559354
AFFX-ThrX-M_at
20.2839
A
0.300606
Total number of rows:
22283
Table truncated, full table size
662 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249379.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM249379.CHP.gz
5.7 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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