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Sample GSM2650819 Query DataSets for GSM2650819
Status Public on Nov 06, 2017
Title MRC-iPS-25_P30
Sample type genomic
 
Source name MRC-iPS-25_P30
Organism Homo sapiens
Characteristics gender: Male
cell type: inducible pluripotent stem cells
cell source: MRC5-derived iPS cells
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing GenomeStudio V2011.1
 
Submission date Jun 06, 2017
Last update date Jan 23, 2018
Contact name Akihiro Umezawa
E-mail(s) umezawa@1985.jukuin.keio.ac.jp
Phone 81-3-5494-7047
Organization name National Center for Child Health and Development
Department Center for Regenerative Medicine
Street address 2-10-1 Okura
City Setagaya-ku
State/province Tokyo
ZIP/Postal code 157-8535
Country Japan
 
Platform ID GPL13534
Series (1)
GSE99716 DNA hypermethylation enhanced telomerase reverse transcriptase expression in human induced pluripotent stem cells

Data table header descriptions
ID_REF
VALUE Average Beta
Detection Pval

Data table
ID_REF VALUE Detection Pval
cg00000029 0.8007919 0
cg00000108 0.9291913 0
cg00000109 0.8503853 0
cg00000165 0.1056805 0
cg00000236 0.7970015 0
cg00000289 0.5908364 0
cg00000292 0.8526915 0
cg00000321 0.4257975 0
cg00000363 0.1102678 0
cg00000622 0.01076486 0
cg00000658 0.7888736 0
cg00000714 0.2822233 0
cg00000721 0.884872 0
cg00000734 0.0753578 0
cg00000769 0.03583003 0
cg00000807 0.8107693 0
cg00000884 0.7984411 0
cg00000905 0.09467476 0
cg00000924 0.3900914 0
cg00000948 0.8754852 0

Total number of rows: 485577

Table truncated, full table size 10984 Kbytes.




Supplementary file Size Download File type/resource
GSM2650819_5822986014_R04C02_Grn.idat.gz 4.0 Mb (ftp)(http) IDAT
GSM2650819_5822986014_R04C02_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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