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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 01, 2018 |
| Title |
200598350041_R03C01 |
| Sample type |
genomic |
| |
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| Source name |
Peripheral Blood
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| Organism |
Homo sapiens |
| Characteristics |
sample_id: 12130953
tissue: Peripheral Blood
gender: Female
age: 66.22
ln(totalpbb): -0.814862939
pbb-153: 0.433
pbb-77: 0
pbb-101: 0
pbb-180: 0
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
AllPrep DNA/RNA Mini Kit (Qiagen, Valencia, CA)
bisulfite conversion protocol: EZ DNA Methylation-GoldTM Kit (Zymo Research, Irvine, CA)
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| Label |
Cy3, Cy5
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| Label protocol |
not provided
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| Hybridization protocol |
HumanMethylationEPIC BeadChip
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| Scan protocol |
BeadStudio
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| Description |
HumanMethylationEPIC BeadChip - standard protocol
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| Data processing |
non-normalized, background subtracted
beta-values
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| Submission date |
Jun 27, 2018 |
| Last update date |
Aug 01, 2018 |
| Contact name |
Sarah Whelan Curtis |
| E-mail(s) |
sarah.elizabeth.whelan@emory.edu
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| Organization name |
Emory University
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| Street address |
101 Woodruff Circle NE, Ste 42
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| City |
Atlanta |
| State/province |
GA |
| ZIP/Postal code |
30322 |
| Country |
USA |
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| Platform ID |
GPL21145 |
| Series (1) |
| GSE116339 |
Exposure to polybrominated biphenyl (PBB) associates with DNA methylation differences across the genome |
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| Supplementary file |
Size |
Download |
File type/resource |
| GSM3228990_200598350041_R03C01_Grn.idat.gz |
6.9 Mb |
(ftp)(http) |
IDAT |
| GSM3228990_200598350041_R03C01_Red.idat.gz |
7.0 Mb |
(ftp)(http) |
IDAT |
| Processed data are available on Series record |
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