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Sample GSM348497 Query DataSets for GSM348497
Status Public on May 01, 2009
Title liver sample time 20.0 hours mx-cre MINUS replicate C batch PHX2
Sample type RNA
 
Source name liver following partial hepatectomy
Organism Mus musculus
Characteristics Genetic: RPS6 homozygous floxed
Genetic: mx-cre transgene MINUS
Strain : C57BL/6
Age: 3 months
Gender : male
Batch: PHX2
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from frozen liver samples using Trizol (Invitrogen), folowing the manufacturer's instructions
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description liver sample collected at 20.0 hours following partial hepatectomy in a mx-cre MINUS transgenic mice homozygous for the RPS6 floxed mutation
Data processing RMA Normalized values
 
Submission date Dec 08, 2008
Last update date Dec 08, 2008
Contact name Alessandro Di Cara
E-mail(s) ale@di-cara.com
Organization name Friedrich Miescher Institute
Street address Maulbeerstrasse 66
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platform ID GPL81
Series (1)
GSE13864 Effect of conditional deletion of S6 ribosomal protein following partial hepatectomy

Data table header descriptions
ID_REF
VALUE RMA Normalized values

Data table
ID_REF VALUE
100001_at 4.218938114
100002_at 12.30245089
100003_at 4.256545089
100004_at 6.916583621
100005_at 7.633977251
100006_at 3.127951361
100007_at 7.656806975
100009_r_at 3.203650465
100010_at 6.853642755
100011_at 5.386691157
100012_at 8.286487424
100013_at 7.053730007
100014_at 4.22632336
100015_at 5.477322956
100016_at 4.699743922
100017_at 4.884278022
100018_at 7.037016616
100019_at 4.92338446
100020_at 6.853595597
100021_at 4.250373309

Total number of rows: 12488

Table truncated, full table size 267 Kbytes.




Supplementary file Size Download File type/resource
GSM348497.CEL.gz 2.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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